Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme318184g00001 ATGGCTGGTGGCGACGAACACAGACTAAGCCTTGAACCTGAGAAACAGAGCCTTCTCAATCGCCACACGGAAAAACACTTCACCGCCGGCGAAATCGTCCGTGACATTATCATCGGCGTCTCCGACGGACTCACCGTCCCATTCGCCCTCGCCGCCGGTCTCTCCGGCGCCAATGCAACTTCTTCCATCGTCCTCACTGCCGGAATCGCAGAAGTCGCCGCCGGTGCAATCTCGATGGGATTGGGCGGTTATTTGGCAGCAAAAGGTGAAGCTGATCATTACAATAGAGAATTGAAAAGAGAA 303 0.5446 MAGGDEHRLSLEPEKQSLLNRHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKGEADHYNRELKRE 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme318184g00001 101 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 101 IPR008217 GO:0005384|GO:0030026
Trme318184g00001 101 Pfam VIT family 33 101 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme318184g00001 Trme-Chr318184 1 303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme318184g00001 5 101 Nodulin-like Gene Family AT3G43660 26.804 5.57e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme318184g00001 K22736 - zju:125420541 176.022