Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31816g00001 ATATTGAATCTCTGCAACTGCAGAGAGAATGTGACGAGAAAGGCTCATGCAGTGATTGATAGGTTTGCTGAGCGTGGACTAAGATCGCTAGGTGTTGCTTATCAGGAAGTACCGGAGAAATCCAGAGACAGTCCTGGGGCTCCGTGGCAGTTCGTTGGATTATTGCCCTTATTCGATCCCCCAAGGCACGACAGTGCTGAAACCATTAGAAGAGCACTGAGCCTTGGCGTGAACGTAAAGATGATCACCGGGGACCAACTTGCCATTGGAAAGGAAACAGGCAGAAGGCTTGGAATGGGAACGAACATGTATCCGTCATCTGCATTGCTTGGAGAAGGTTCTTCTAACTTAGATGTTCCTATTGATGAGTTGATAGAGAAAGCCGATGGATTTGCAGGAGTATTTCCCGACACTTCTCCAAAGTGTTGGCGTGCCATACACGTTTTGGACACCGATACTTTTTCAGGCACAGTCATATCATACTTTTGGTCATGA 495 0.4687 ILNLCNCRENVTRKAHAVIDRFAERGLRSLGVAYQEVPEKSRDSPGAPWQFVGLLPLFDPPRHDSAETIRRALSLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEGSSNLDVPIDELIEKADGFAGVFPDTSPKCWRAIHVLDTDTFSGTVISYFWS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31816g00001 164 FunFam Plasma membrane ATPase 51 145 - -
Trme31816g00001 164 Gene3D - 59 137 IPR023214 -
Trme31816g00001 164 Gene3D - 1 58 IPR023299 GO:0000166
Trme31816g00001 164 PRINTS H+-transporting ATPase (proton pump) signature 15 33 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trme31816g00001 164 PRINTS H+-transporting ATPase (proton pump) signature 128 144 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trme31816g00001 164 PRINTS P-type cation-transporting ATPase superfamily signature 53 64 - -
Trme31816g00001 164 PRINTS P-type cation-transporting ATPase superfamily signature 75 85 - -
Trme31816g00001 164 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 64 IPR023299 GO:0000166
Trme31816g00001 164 FunFam Membrane H(+)-ATPase1 1 58 - -
Trme31816g00001 164 SUPERFAMILY HAD-like 50 102 IPR036412 -
Trme31816g00001 164 PANTHER CALCIUM-TRANSPORTING ATPASE 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31816g00001 Trme-Chr31816 108 1008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31816g00001 1 137 Primary Pumps ATPases AT2G24520 82.014 2.13e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31816g00001 K01535 - thj:104803871 237.654