Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31797g00001 CCTCTCCCACTCTCAAACCTCATTTCTTCAAATTCAAAACGCAACACTCTCGTTGTTAAAGCTTCATCAGCTTCCATCACACCAGCTCCGGCTCCAGCTCCAGCACCGGCTCAACCATGGCAAGGCGCCGCGATAAAACCACTCTTAGCATCAATAGCAACCGGAGTTATACTCTGGTTCGTTCCCACTCCGACAGGTGTATCAAGAAAAGCGTGGCAGTTACTCGCGATTTTCTTAGGAACGATCGTCGGAATCATCACTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNACCAAAACCCTAACCTTTGTTGCTGCATTCTCTGGTTTCGGTGATCCAATTCCATGGCTAATTTGTCTCGCATTTTTCTTCGCTAAAGGTTTCATCAAAACTGGATTAGGTAACCGTGTTGCGTATCAATTCGTTTCGCTTTTCGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTCAGTGAAGCTTTATTGGCACCGGCGATTCCTTCGGTTTCGGCNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTGTGGAAGTAATGTTGGTGATGGAACTGAGGATAAGCTTGGGTCTTGGTTGATGCTTACTTGTTTTCAGACTTCTTGTATTTCGTCGGCTATGTTTTTGACTGCAATGGCTGCGAATCCGCTTTGTGCTACGCTTACTTTGAATTCAATTAACCAGACAATTGGTTGGTTGGATTGGGCTAAAGCTGCTATTGTGCCTGGTTTGGTGTCGTTGATATTGGTGCCGTTGATTTTGTATGTTATATATCCACCTACCTTGAAATCTAGTCCTGATGCACCCAAGCTTGCTAGGGAAAAGTTGGAGAAAATGGGGCCTATGACAAGCAATGAGAAAATCATGACTGCTACTTTGTTTCTTACG 948 0.3966 PLPLSNLISSNSKRNTLVVKASSASITPAPAPAPAPAQPWQGAAIKPLLASIATGVILWFVPTPTGVSRKAWQLLAIFLGTIVGIITXXXXXXXXXXXXXXXXXXTKTLTFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSAXXXXXXXXXXXXXXXXCGSNVGDGTEDKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLILVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTSNEKIMTATLFLT 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31797g00001 316 NCBIfam DASS family sodium-coupled anion symporter 62 314 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trme31797g00001 316 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 23 316 IPR030676 -
Trme31797g00001 316 Pfam Sodium:sulfate symporter transmembrane region 47 312 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31797g00001 Trme-Chr31797 203 1150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31797g00001 1 316 Antiporters AT5G12860 70.625 2.48e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31797g00001 - - gmx:100796365 417.927