Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme317703g00001 GTTGGTAACAGGAAGCTGCTGGAGGAAAGTGGCATAAATATTTCTACTGAAGTGGAAAGTTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCATGCGATGATATATTGATTGGAGTCTTGGGCGTTGCAGACTCACTTAAGCGAGAAGCCTTTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGAGCTGT 248 0.4435 VGNRKLLEESGINISTEVESFVVELEESAKTGILVACDDILIGVLGVADSLKREAFVVIEGLQKMGITPVMVTGDNWRTARAV 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme317703g00001 83 Gene3D - 52 83 IPR023214 -
Trme317703g00001 83 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 83 - -
Trme317703g00001 83 Pfam haloacid dehalogenase-like hydrolase 2 82 - -
Trme317703g00001 83 SUPERFAMILY HAD-like 32 83 IPR036412 -
Trme317703g00001 83 Gene3D - 1 51 IPR023299 GO:0000166
Trme317703g00001 83 FunFam Copper-exporting P-type ATPase 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme317703g00001 Trme-Chr317703 91 338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme317703g00001 1 83 Primary Pumps ATPases AT5G44790 65.060 2.20e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme317703g00001 K17686 - gmx:100778219 139.043