Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31764g00001 ATGCTTTCAGGTAAATCAAAAACCTTTGATTGGACCAGCAGACTTGGAATTGCATCTACAATAGCTGAAGCATTAGCATTCATGCATCAAGAGCTAGGTCAACATGGTATTATTCATGGTAACATGAAATCNTCAAACATTTTGCTAAACAATAACATGGAGCCTTTTATAAGTGAATATGGTACTATGCCTAAGGATGATCATCAACAAAGTTCAACTTTTGCAACACCTATTGCTAATGATGCATTCAAAGGAGATGTTTATGGCTTTGGTGTTATTCTTCTTGAACTTCTTACTGGAAAATTGGTGAAGAATGATGGTATTGACTTGACTGATTGGGTTCAATCAGTTGTAAGGGAAGAATGGACAGGTGAAGTGTTTGATAGGTCATTATTGAAAGAGTATGCAAGTGAAGAGAGGATGGTTAATATGCTTCAAGTGGCTATAAGATGTGTTAATAGTTCCTTAGAGGCTAGGCCAAGTATGAATCAAGTGGTTCTTATGATTAACACTATCAAAGATGAAGAGGAAAAATCATTGATTTACCAAGTTTGA 555 0.355 MLSGKSKTFDWTSRLGIASTIAEALAFMHQELGQHGIIHGNMKSSNILLNNNMEPFISEYGTMPKDDHQQSSTFATPIANDAFKGDVYGFGVILLELLTGKLVKNDGIDLTDWVQSVVREEWTGEVFDRSLLKEYASEERMVNMLQVAIRCVNSSLEARPSMNQVVLMINTIKDEEEKSLIYQV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31764g00001 184 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 177 IPR046959 -
Trme31764g00001 184 SUPERFAMILY Protein kinase-like (PK-like) 7 169 IPR011009 -
Trme31764g00001 184 Gene3D Transferase(Phosphotransferase) domain 1 1 183 - -
Trme31764g00001 184 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31764g00001 184 Pfam Protein kinase domain 16 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31764g00001 Trme-Chr31764 422 976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31764g00001 4 173 Receptor kinase-like Gene Family AT3G08680 42.162 2.15e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme31764g00001 Pkinase 7.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31764g00001 - - vvo:131595445 304.293