Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31691g00001 ATGTTGGGAATAGTATACCGTGATCTCAAGCCAGAAAATGTGTTAGTAAGATCAGATGGCCATATCATGCTCACAGACTTTGATCTCTCATTAAAATGTGATGCTGCTGATTCAACACCAGCCCAGATAATAATCTCAAGTCAAAACTCTCCACAAGTAATCCCACAAAAAAATCCCCACACTGAATCCTCTCAATTTGCTTCATCTTCATGCATACTACCTAATTGTATTGTCCCAGCAGTGTCTTGTTTCCAACCAAAACGCAAACGAAAGAAGAAACAAAACCAGTTTAATGGGCCTGAGTTTGTTGCTGAGCCCATTGATGTTCGATCCATGTCATTTGTTGGGACCCATGAATACTTAGCTCCTGAGATAGTGTCTGGTGAAGGACATGGTAGTGCTGTGGATTGGTGGACCTTAGGAATATTTATATTTGAATTATTTTATGGTGTCACACCTTTTAGAGGCTTGGATAATGAATTAACTTTAGCAAATATTGTGGCTCGAGCTTTGGAGTTCCCAAAGGAACCCACCGTGCCAGCCACGGCAAAAGATCTTATCTCACAGTTATTGGTTAAGGATCCAGCTAGGAGATTAGGATCAATAATGGGGGCTTCTACAATCAAACACCACTCGTTTTTTCAAGGTGTGAATTGGGCATTGTTAAGGTGTACAACTCCACCTTATGTTCCACCACCTTATAGTAAAGATAAAGAAGATTTATCTGATGATAGTTGTCCACAAACTCCTATTGATTATTATTGA 765 0.3974 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDAADSTPAQIIISSQNSPQVIPQKNPHTESSQFASSSCILPNCIVPAVSCFQPKRKRKKKQNQFNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKDPARRLGSIMGASTIKHHSFFQGVNWALLRCTTPPYVPPPYSKDKEDLSDDSCPQTPIDYY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31691g00001 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Trme31691g00001 254 PANTHER FLIPPASE KINASE 1-RELATED 1 236 - -
Trme31691g00001 254 Pfam Protein kinase domain 111 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31691g00001 254 Pfam Protein kinase domain 3 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31691g00001 254 FunFam serine/threonine-protein kinase D6PK-like 109 232 - -
Trme31691g00001 254 Gene3D Transferase(Phosphotransferase) domain 1 110 232 - -
Trme31691g00001 254 Gene3D Transferase(Phosphotransferase) domain 1 3 81 - -
Trme31691g00001 254 MobiDBLite consensus disorder prediction 233 254 - -
Trme31691g00001 254 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31691g00001 254 SMART serkin_6 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31691g00001 254 SUPERFAMILY Protein kinase-like (PK-like) 2 243 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31691g00001 Trme-Chr31691 272 1036 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31691g00001 1 254 AGC Kinase Gene Family AT3G44610 70.930 1.93e-130 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme31691g00001 Pkinase 3.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31691g00001 K08286 - gmx:100792738 418.313