Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31665g00001 AGAAGAGCAATAGATTTAGCTTATTCTGATGATAAAATCATTTTGCTTGATTGGATTAGAAGGCTTTGTGATGAAGGGAAGCTTATAGAAGCAGCTGATATAAGGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNTTGTGGAAGCACTTTCTGATTTAAGTTTTAAACTTCCTTCACTTCCTTCATTTCTATCACATCCTCTTTATATCTCTTTGTCTTCACCAAGTGAAACTACTAGTCCTAGTAGTACTAGTGGCACGATTTCGGTCTCGGAAAATGTTAGCTTGATCACAAACTATAGTTCATCAAACTATGTTACAGCTGCAGAGTTAAGAAGGGTAGCTGAACTTGACTTTGGAACTGCTTATCATGGAGTTCTTGATGATAATTGTCATGTTTTGGTGAAAAGGTTGGGAATGAAGACGTGTCCTGCATTGCGCGATAGATTCTCGAACGAACTCAGAAATCTTGGTAAGCTTCGGCATAGGAATTTGGTTCAGCTCCGCGGATGGTGTACCGAACAAGGGGAGATGCTCGTGGTTTACGATTACTCGGCTAGTAGAATTCTCAGTCAACAGCTTCTTCAAATTCATAACAAAGGTACGAACGGATATCGATGTTCGGTACTTGAATGGCATCATAGGTACACCATAGTGAAATCACTTGCTTCTGCTGTTCTTTATCTACATGAAGAATGGGATGAACAAGTGATTCACAGAAACAT 800 0.3425 RRAIDLAYSDDKIILLDWIRRLCDEGKLIEAADIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEALSDLSFKLPSLPSFLSHPLYISLSSPSETTSPSSTSGTISVSENVSLITNYSSSNYVTAAELRRVAELDFGTAYHGVLDDNCHVLVKRLGMKTCPALRDRFSNELRNLGKLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQQLLQIHNKGTNGYRCSVLEWHHRYTIVKSLASAVLYLHEEWDEQVIHRN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31665g00001 266 Coils Coil 34 35 - -
Trme31665g00001 266 SUPERFAMILY Protein kinase-like (PK-like) 143 266 IPR011009 -
Trme31665g00001 266 Gene3D Transferase(Phosphotransferase) domain 1 109 266 - -
Trme31665g00001 266 ProSiteProfiles Protein kinase domain profile. 133 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31665g00001 266 Pfam Protein tyrosine and serine/threonine kinase 139 266 IPR001245 GO:0004672|GO:0006468
Trme31665g00001 266 PANTHER - 143 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31665g00001 Trme-Chr31665 185 1152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31665g00001 137 266 Receptor kinase-like Gene Family AT5G65600 42.748 2.75e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trme31665g00001 PK_Tyr_Ser-Thr 1.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31665g00001 - - vun:114184452 283.108