Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31637g00001 AATGCAGATGTGCTAGGAAATGCCAAAGGTACAGCAGCAGGGATTGCCCCTCACGCTCACCTAGCAATTTATAAAGTGTGCTTTGGTGAAGACTGTCCCGAGAGTGATATACTAGCGGCATTAGACGCAGCTGTGGAGGATGGTGTCGATGTAATATCAATATCGCTTGGTCTAAATGAGCCACCTNCATTTTTCAATGATAGCACTGCCATAGGCGCATTTGCAGCAACCCAAAAGGGAATCTTTGTAAGTTGTTCAGCAGGAAACTCTGGACCTTCTGAAGGCTCCTTGGTTAATGGAGCCCCATGGATCCTCACAGTCGGAGCTAGCACTATTGACAGAAGCATTGTAGCAACAGCAGTGTTAGGAAATGGGGAAGAATTTGATGGTGAAACTGTTTTCCAGCCTTCTGATTTCACTCCAACTTTGTTGCCCTTAGCATTTGCAGGAACGAATGGCAAACTCGAATCAACATTTTGTGCTAATGGAACCTTGAATGACATTGATTTCAAAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGGTATAGGAAGAATTGCCAAAGGACAGGAAGTAAAAAGAGCAGGTGGTGCCGCCATGATTCTCACGAATGATGAAATCAACGGTTTCAGTCTCTCGGCTGATGTACATGTCCTACCAGCAACACATGTAAGCTTTGCTGCTGGACAAAAGATCAAGGCCTATATAAATTCAACTTCAACGCCTACAGCAACCATTTCATTTAAGGGAACGATTATCGGAAACTCACAATCCCCAGCCGTTGCATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGCCCTGGGATACTAAAACCAGATATCATAGGACCGGGCGTGAACATCCTAGCTGCCTGGCCATTCCCTCTGGATAACAGCANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNCCAGCAGCCATAAAATCTGCCATATTGACTACCGCAGACACACTAAATTTAGAAAACAAACTCATTGTTGATGAAACACTTCAGCCGGCAAATATCTTTGCCACAGGTTCGGGCCACGTGAATCCATCAAGAGCAGATGATCCTGGGTTA 1152 0.4141 NADVLGNAKGTAAGIAPHAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLNEPPXFFNDSTAIGAFAATQKGIFVSCSAGNSGPSEGSLVNGAPWILTVGASTIDRSIVATAVLGNGEEFDGETVFQPSDFTPTLLPLAFAGTNGKLESTFCANGTLNDIDFKGKVVLCERGGGIGRIAKGQEVKRAGGAAMILTNDEINGFSLSADVHVLPATHVSFAAGQKIKAYINSTSTPTATISFKGTIIGNSQSPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLDNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAIKSAILTTADTLNLENKLIVDETLQPANIFATGSGHVNPSRADDPGL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31637g00001 384 Pfam Subtilase family 9 292 IPR000209 GO:0006508|GO:0008236
Trme31637g00001 384 CDD PA_subtilisin_like 119 246 - -
Trme31637g00001 384 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 334 384 IPR045051 -
Trme31637g00001 384 Pfam PA domain 159 232 IPR003137 -
Trme31637g00001 384 ProSiteProfiles Serine proteases, subtilase domain profile. 1 380 - -
Trme31637g00001 384 FunFam subtilisin-like protease SBT1.5 113 253 - -
Trme31637g00001 384 Coils Coil 296 299 - -
Trme31637g00001 384 SUPERFAMILY PA domain 132 245 IPR046450 -
Trme31637g00001 384 Gene3D Peptidase S8/S53 domain 334 384 IPR036852 GO:0004252|GO:0006508
Trme31637g00001 384 Gene3D Peptidase S8/S53 domain 1 293 IPR036852 GO:0004252|GO:0006508
Trme31637g00001 384 SUPERFAMILY Subtilisin-like 10 383 IPR036852 GO:0004252|GO:0006508
Trme31637g00001 384 Gene3D - 113 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31637g00001 Trme-Chr31637 1 1152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31637g00001 2 384 Subtilisin-like Serine Gene Family AT1G04110 44.757 1.74e-98 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31637g00001 - - gmx:100785376 590.112