Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31612g00001 GCTGCCGGATCTGGTATTCCTGAAATCAAGGGTTACTTAAACGGAGTTGATACTCACGGCATCCTTCTTTTCAGAACTTTGATTGGAAAGGTATTTGGAAGCATTGGTTCAGTGGGGGGAGGCCTCGCTTTGGGTAAAGAAGGTCCTCTAGTCCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGTAAGGACTTAA 201 0.4527 AAGSGIPEIKGYLNGVDTHGILLFRTLIGKVFGSIGSVGGGLALGKEGPLVHTGACIASLLGQVRT 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31612g00001 66 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 65 - -
Trme31612g00001 66 Pfam Voltage gated chloride channel 1 62 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Trme31612g00001 66 Gene3D Clc chloride channel 1 66 - -
Trme31612g00001 66 SUPERFAMILY Clc chloride channel 1 64 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31612g00001 Trme-Chr31612 55 461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31612g00001 1 63 Ion Channels AT5G26240 92.063 7.86e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31612g00001 K05016 - dct:110110988 128.642