Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31526g00001 ATGAGTGTGAGTGATCTTAAGTCTTTACCTTTTACTGTCAGTGAAGGACCAGATGGGTACCCTTTGATTCATGCTAGGTATTTAGGGGAAGTTAAAACGTTTACTCCTATGCAAGTGTTTGCGATGATGTTGTCGAATATGAAAGAGATAACTACGAAAAATCTTAATGCTGCGGTTCATGATTGTTGCATTGCAATTCCGGTTTATTTTACTGATCTTCAAAGAAGAGCTGTTTTGGATGCTGCAACTATTGCTGGGTTGCATCCGCTTCGGTTGCTTCATGAAACTACCGCGACTGCATTAGCGTATGGGATTTATAAGACGGATCTTCCTGAAAATGATCCGTTGATTGTGGCCTTTGTTGATATTAGACATGCTAGTATGCAGGTTTTGTTCCACCATTTAGCTGGGAAGTTTAAGGAGGAGTACAAAATCCATGTTCATCAGAATGCGAGGGCATGTTTGAGGCTTAGGGCTGCTTGTGAGAAGATGAAGAAGATGCTTAGTGCAAATCCTGTGATGCCCCTGAACATTGAGTGCTTGATGGATGAGACGGATGTGAAGGGTATCATGAAGCGTGAGG 583 0.422 MSVSDLKSLPFTVSEGPDGYPLIHARYLGEVKTFTPMQVFAMMLSNMKEITTKNLNAAVHDCCIAIPVYFTDLQRRAVLDAATIAGLHPLRLLHETTATALAYGIYKTDLPENDPLIVAFVDIRHASMQVLFHHLAGKFKEEYKIHVHQNARACLRLRAACEKMKKMLSANPVMPLNIECLMDETDVKGIMKRE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31526g00001 194 PANTHER HSC70CB, ISOFORM G-RELATED 130 194 - -
Trme31526g00001 194 SUPERFAMILY Actin-like ATPase domain 4 107 IPR043129 -
Trme31526g00001 194 Gene3D - 108 130 - -
Trme31526g00001 194 Gene3D - 36 107 - -
Trme31526g00001 194 SUPERFAMILY Actin-like ATPase domain 129 193 IPR043129 -
Trme31526g00001 194 Gene3D - 4 35 - -
Trme31526g00001 194 FunFam Heat shock 70 kDa protein 4 127 194 - -
Trme31526g00001 194 Gene3D Actin; Chain A, domain 4 131 194 - -
Trme31526g00001 194 FunFam Heat shock 70 kDa protein 4 33 115 - -
Trme31526g00001 194 Pfam Hsp70 protein 4 130 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31526g00001 Trme-Chr31526 1 884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31526g00001 4 193 Calmodulin-binding Proteins AT5G02500 31.193 6.84e-32 118