Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31497g00001 ATGTCAAAATCATCAATGGAACTCCCTGATTGTATTTATCCATGTCAACCAATAACTAATATTTCACCAAGTGCTCCAACACCAAAACATTCTCTCTATCTTTCTAATCTTGATGACCAAAAATTTCTTAGATTTTCTATCAAGTATTTGTACATTTTCAAGAAATCAGTGAACTTGGATCATTTGAAGTGTTCTTTGTCTAGAGTATTAGTTGATTATTACCCTTTAGCTGGGAGATTGAGGAGTTGTTCCTCTAATTTGGATGATGATAAGAAGCTTGAAGTGGATTGCAATGGTGAAGGTGCTTTGTTTGTTGAAGCTTTCATGGCTATAAGTGCTGATGAATTAGTTGAACCTTCTAAGTTGCCAAACAAATCATGGAGGAAGTTCATGTATAAAGTGGAATCTCAAAGTTTCTTAGATGTTCCTCCTCTTATTGTTCAG 444 0.3446 MSKSSMELPDCIYPCQPITNISPSAPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVNLDHLKCSLSRVLVDYYPLAGRLRSCSSNLDDDKKLEVDCNGEGALFVEAFMAISADELVEPSKLPNKSWRKFMYKVESQSFLDVPPLIVQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31497g00001 148 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 148 - -
Trme31497g00001 148 Pfam Transferase family 20 148 - -
Trme31497g00001 148 Gene3D - 16 148 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31497g00001 Trme-Chr31497 48 491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31497g00001 19 147 Monolignol Biosynthesis Gene Families AT5G48930 31.343 1.83e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31497g00001 - - aip:107645267 227.254