Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31470g00001 ATGACTACTGCTATTGCTATTGAGGATGTTAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACACAAAAATTTGATTAAATTCTATGAGGCTTATGAAGATCATGATAATGTCTATATAGTCATGGAGTTGTGCGAAGGAGGCGAGCTTTTGGACAGAATACTATCGAGAGGTGGGAAATACTCAGAGGAAGATGCAAAAGCTGTCATGACACAAATACTGAATGTTGTTGCATTTTGCCATCTACAAGGTGTTGTTCATCGTGATCTTAAACCTGAGAACTTCTTGTTTTCAACCAAAGATGAGAACTCAGAGCTGAAGGCGATAGACTTTGGTTTGTCGGATTTTGTCAAACCTGGTATGTTTTGA 372 0.3817 MTTAIAIEDVRREVKILRALNGHKNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMTQILNVVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKPGMF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31470g00001 123 Pfam Protein kinase domain 8 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31470g00001 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31470g00001 123 SUPERFAMILY Protein kinase-like (PK-like) 6 120 IPR011009 -
Trme31470g00001 123 FunFam CDPK-related kinase 1 2 50 - -
Trme31470g00001 123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Trme31470g00001 123 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 120 - -
Trme31470g00001 123 SMART serkin_6 3 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31470g00001 123 Gene3D Transferase(Phosphotransferase) domain 1 2 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31470g00001 Trme-Chr31470 84 923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31470g00001 1 121 EF-hand Containing Proteins AT3G50530 86.777 3.88e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme31470g00001 Pkinase 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31470g00001 K13412 - nnu:104605588 228.794