Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3144g00001 ATGAAGGAGTTTGAACAGAAGAGTTCTCAACTTGCACAAAATTTGAAAAGTCTTGAAGAAAAGCTCTTGAGTTTGGAGAATGAAAATCATGTCCTTCGTCAGAAAGCCTTAAGTGTATCTCCAAAGAGTAATCGTCCAGGTTTTGCAAAGTCGTCATTAGAAGATAACTATGAATTCCTCGCTAGGTGTATCAAAGAGAATTTGGGGTTCAAAAATGGTAAACCTGTAGCAGCTAGTATCATATACAAATGTCTTCTCCATTGGCATGCATTTGAATCTGAGCGCACGGCCATATTTGATTACGTAATTGATAGAATTAATGATGCCATCAAAGTTAGCGACAACGACACTGTCTTGCCATATTGGCTGTCCAATACCTCCGCACTTGTGTGCCTTTTACAGAGAAATGTCCGTTCAAATGGTTTCTTAACTACCACTGCTCAACGTTATGCTGGATCATATGGCTTGACCACCCG 476 0.3992 MKEFEQKSSQLAQNLKSLEEKLLSLENENHVLRQKALSVSPKSNRPGFAKSSLEDNYEFLARCIKENLGFKNGKPVAASIIYKCLLHWHAFESERTAIFDYVIDRINDAIKVSDNDTVLPYWLSNTSALVCLLQRNVRSNGFLTTTAQRYAGSYGLTTR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3144g00001 159 ProSiteProfiles Dilute domain profile. 100 159 IPR002710 -
Trme3144g00001 159 Coils Coil 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3144g00001 Trme-Chr3144 1 2321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3144g00001 1 158 Myosins gene family AT4G33200 45.320 4.26e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3144g00001 K10357 - gmx:100804699 227.254