Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31416g00001 ATGGAAATTGTTGGAAGTCTTAAACATGAGAATGTGGTTGAGCTGAAGGCATATTATTATTCCAAAGATGAGAAACTGATGGTATATGATTACTACAACCAAGGGAGTGTCTCTTCTTTGTTGCATGGGAAAAGAGGAGAGGACAAGGTGCCTTTAGATTGGGATACTCGGTTGAGAATAGCTTTAGGTGCTGCAAGAGGCATCGCTCGCATCCATGTTGAAAATGGTGGTAAACTTGTGCATGGAAACATCAAGTCCTCAAACATCTTTCTCAATACTAAACAGCACGGATGTGTATCTGATCTTGGTCTAGCAACCATATCA 324 0.4074 MEIVGSLKHENVVELKAYYYSKDEKLMVYDYYNQGSVSSLLHGKRGEDKVPLDWDTRLRIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQHGCVSDLGLATIS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31416g00001 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31416g00001 108 PANTHER OS05G0588300 PROTEIN 1 106 - -
Trme31416g00001 108 SUPERFAMILY Protein kinase-like (PK-like) 2 107 IPR011009 -
Trme31416g00001 108 Pfam Protein kinase domain 2 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme31416g00001 108 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31416g00001 Trme-Chr31416 1 1131 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31416g00001 1 107 Receptor kinase-like Gene Family AT4G23740 76.636 8.04e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme31416g00001 Pkinase 8.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31416g00001 - - gmx:100814524 201.83