Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme313380g00001 ATGGCGGAAACTCACTTTGGAGGAGATGACTTTGATCAGAGAATGGTAAAGCATTTTGTGAAGGAGTTCAAGAGGCGGAAGCATAAGAAGGATATTAGTGGGAACTCAAGGGCCCTTAGAAG 122 0.4426 MAETHFGGDDFDQRMVKHFVKEFKRRKHKKDISGNSRALR 40
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme313380g00001 40 Gene3D Actin; Chain A, domain 4 7 40 - -
Trme313380g00001 40 Pfam Hsp70 protein 3 39 IPR013126 GO:0005524|GO:0140662
Trme313380g00001 40 SUPERFAMILY Actin-like ATPase domain 4 39 IPR043129 -
Trme313380g00001 40 PANTHER HEAT SHOCK PROTEIN 70KDA 3 40 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme313380g00001 Trme-Chr313380 18 139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme313380g00001 2 40 Calmodulin-binding Proteins AT1G16030 71.795 1.50e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme313380g00001 K03283 - ncol:116253389 65.0846