Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31295g00001 GCAACACCAAAACAGATAAGGGAGTTGATGAAGGTTGATGGTTTGACCAATGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTACACACAAGAAGACCAAGTCCAAGTTCCCAAACAGGTGCACCAGCAGCACAGTTAGTTGTTTTAGGAGGTATATGGGTCCCACCAGAATATGCAACTGCAGCACATACAGGAGTAGGAACCCCTACTCTTTATGGTGCACATCCTACTTCTCATCATCTTACTTTGCCACACTATTGTACTGCTCCTGGACAGGAGCAGTATTATACTACTGCACCGCCGCCGCAGCATCAGCAGCTACTTCCGCCGCCTCACCATATGCACCATGTTTACAAGACTACGCCGCATGGTCAGGGTTCGCCGGAGACGGGTGGAGATGGGTTGGAGAGTATCGAGAATGGGAAGTCGGAGAGTAGTAGCTGGAAAGATGGGAGTTCTGAGGAGAATGAAGGGGAGAGGAAAGGGTTTGTTGAAGAGAGCAATGGGAGTGACATCACTCTCAAATTTTAA 534 0.4794 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSSQTGAPAAQLVVLGGIWVPPEYATAAHTGVGTPTLYGAHPTSHHLTLPHYCTAPGQEQYYTTAPPPQHQQLLPPPHHMHHVYKTTPHGQGSPETGGDGLESIENGKSESSSWKDGSSEENEGERKGFVEESNGSDITLKF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31295g00001 177 MobiDBLite consensus disorder prediction 149 167 - -
Trme31295g00001 177 NCBIfam myb-like DNA-binding domain, SHAQKYF class 1 30 IPR006447 GO:0003677
Trme31295g00001 177 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 32 IPR017930 -
Trme31295g00001 177 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 150 IPR044787 GO:0003700|GO:0006355
Trme31295g00001 177 MobiDBLite consensus disorder prediction 95 177 - -
Trme31295g00001 177 SUPERFAMILY Homeodomain-like 1 33 IPR009057 -
Trme31295g00001 177 Gene3D - 1 33 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31295g00001 1 177 G2-like Transcription Factor Family AT2G03500 51.562 4.54e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trme31295g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31295g00001 - - tpra:123921036 346.665