Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31275g00001 ATGAATGCATCAATGTTCATTGGGAGCTACATAGTGGCATTTGCATTGTTATGGAGATTGGCCATTGTTGGATTCCCTTTTGTGATTTTTCTTGTGATTCCTGGTTTGATGTATGGAAGAACTTTGATGGGATTGGCTAAAAAAATCAGAGAAGAGTACAATCAAGCCGGTACAATAGCAGAACAAGCAATATCTTCAATAAGAACTGTTTATTCCTTTGCAGGAGAAAGCAAAACCATAGCTGCTTTCTCTGATGCTTTGGATGGATCAGTGAAATTGGGATTGAAACAAGGTTTGGCTAAAGGTTTAGCCATAGGAAGCAATGGTGTTGTTTTTGCTATATGGTCTTTTATGTCCTATTATGGTAGCAGAATGGTCATGTATCATGGTGCTAAAGGTGGTACTGTTTTTGCAGTTGGAGCATCACTAGCACTTGGTGGATTGTAA 447 0.387 MNASMFIGSYIVAFALLWRLAIVGFPFVIFLVIPGLMYGRTLMGLAKKIREEYNQAGTIAEQAISSIRTVYSFAGESKTIAAFSDALDGSVKLGLKQGLAKGLAIGSNGVVFAIWSFMSYYGSRMVMYHGAKGGTVFAVGASLALGGL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31275g00001 148 PANTHER ABC TRANSPORTER B FAMILY 1 147 IPR039421 -
Trme31275g00001 148 Pfam ABC transporter transmembrane region 2 138 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme31275g00001 148 SUPERFAMILY ABC transporter transmembrane region 2 140 IPR036640 GO:0005524|GO:0016020
Trme31275g00001 148 Gene3D ABC transporter type 1, transmembrane domain 1 148 IPR036640 GO:0005524|GO:0016020
Trme31275g00001 148 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 148 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31275g00001 Trme-Chr31275 36 482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31275g00001 6 148 Calmodulin-binding Proteins AT2G36910 38.194 2.13e-24 96.3