Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme312488g00001 ATGGCAAATAGTTATGATATATTAAGACAGTTTTCAGCAGATGATTTTGCAAAGAAGGGTTTAACCGAACGTGTAAAGATTGAGGATGTACAGTTAACGGAGGAAGAGATGGGCATGTACATTGATCTACATCCTTTTACTAATGCTTCGCCTTACACTGTTGTGGAAACAATGTCATTGGCGAAGGCACTTATACTTTTTCGAGAAGTCGGTTTAAGACACTTGCTTGTGATACCCAAGATCCCCGGT 249 0.3976 MANSYDILRQFSADDFAKKGLTERVKIEDVQLTEEEMGMYIDLHPFTNASPYTVVETMSLAKALILFREVGLRHLLVIPKIPG 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme312488g00001 83 SUPERFAMILY CBS-domain pair 25 79 IPR046342 -
Trme312488g00001 83 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 5 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme312488g00001 Trme-Chr312488 29 277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme312488g00001 6 80 Ion Channels AT5G33280 76.000 5.81e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme312488g00001 K05016 - gmx:100817901 128.257