Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31233g00001 ATGCCTGCGAGTCTCATCAGACTTCACTTTCATGATTGTTTTGTTCGAGGTTGTGATGCATCAGTTTTGTTGAACAACACTGCTACTATTGAGAGCGAACAAGATGCTGCTCCAAATAACAACTCCTTAAGAGGATTGGATGTTATCAATAACATTAAGACCGCGGTGGAAAAAGCTTGTCCTAATACAGTTTCTTGTGCTGATATTCTTACACTTGCTGCTGAAAAATCTTCTATTCAGACTGGGGGTCCAAGCTGGTCAGTTCCACTCGGAAGAAGGGATAGTCTAAGAGCAAATAGAACCCTTGCTAATCAAAACCTTCCGGCTCCCTTTTTCAACCTTACTCAACTAAAAGCTGCATTTGCTGCTCAAGGCCTCAACACGGTTGATCTAGTAACACTCTCAG 406 0.4236 MPASLIRLHFHDCFVRGCDASVLLNNTATIESEQDAAPNNNSLRGLDVINNIKTAVEKACPNTVSCADILTLAAEKSSIQTGGPSWSVPLGRRDSLRANRTLANQNLPAPFFNLTQLKAAFAAQGLNTVDLVTLS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31233g00001 135 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Haem peroxidase superfamily signature 130 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PANTHER PEROXIDASE 72-RELATED 1 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Plant peroxidase signature 129 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 SUPERFAMILY Heme-dependent peroxidases 2 135 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 ProSiteProfiles Plant heme peroxidase family profile. 1 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 Pfam Peroxidase 1 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme31233g00001 135 Gene3D - 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31233g00001 Trme-Chr31233 277 1082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31233g00001 3 135 Peroxidase AT2G38380 65.672 6.35e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31233g00001 K00430 - gmx:100804829 230.335