Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31230g00001 GGAACTGAAGCTGTGGAAGTTATAACCTTTGATAGTACGGAAGTTGACGATCTTTACTTAAAGCCTGATTCCTTTAGAAACATGACAAACTTAAGATATCTTAAAATCTATAATGCATCTGATGGGAGCACATGCAATGTGTACTTTCCCGATGGTCTTGAGTGGCTATCTGATAAATTGAGGTACCTTTGGTGGGATGGATACTGCCTTGAGTATTTACCATCAACCTTTTGTGCTGAAATGCTTGTAGAGCTTCACATGAGTCATAGCAAGCTTAAAAAGCTATGGGATGGCGTTCAGAATCTTGTGAATTTAATTTCATTTGTGCTTGACGACTCCAAAGATTTGGTTGAGATCCCAAACTTGTCTAGGGCTACAAATCTTGTATCCGTATACCTCAGAAAATGTGAAAGCTTGTGTCAGCTCCATCCATCCATTTTATCTCTCCCCCGGCTTACACAGCTACTTTTACGGGGTTGCATAAAGCTTGAAAGCCTTAAAACCAACATTCATTCAAAATCTCTACGTGAACTCGTTCTCAGTGGTTGTTCATCTCTCAGAATTTTCTGTGACATCGGAGGAAATGACACATTTGTCCTTACGCGGCACTGCTGTACATGA 621 0.4042 GTEAVEVITFDSTEVDDLYLKPDSFRNMTNLRYLKIYNASDGSTCNVYFPDGLEWLSDKLRYLWWDGYCLEYLPSTFCAEMLVELHMSHSKLKKLWDGVQNLVNLISFVLDDSKDLVEIPNLSRATNLVSVYLRKCESLCQLHPSILSLPRLTQLLLRGCIKLESLKTNIHSKSLRELVLSGCSSLRIFCDIGGNDTFVLTRHCCT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31230g00001 206 Pfam Leucine Rich Repeat 82 100 IPR011713 -
Trme31230g00001 206 Gene3D Ribonuclease Inhibitor 3 195 IPR032675 -
Trme31230g00001 206 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 188 IPR044974 GO:0006952
Trme31230g00001 206 SUPERFAMILY L domain-like 18 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31230g00001 Trme-Chr31230 185 991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31230g00001 1 195 WRKY Transcription Factor Family AT4G12020 41.379 5.86e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31230g00001 - - mtr:120579573 250.366