Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme312280g00001 CGAGTTGAAGAATTGGGTGGTTACGTAGAGGATGGTTATCTTAATGGCGTTTTATCAGTTACGAGAGCACTAGGGGACTGGGACATGAAGTTACCCAGGGGTGCTCCCTCACCTTTGATTGCAGAGCCTGAGTTCCGCCAAATGGTTCTAACAGAGGACGACGAATTCCTCATCATTGGATGTGATGGCATCTGGGACGTGATGACAAGTCAGCATGCCGTTAGCCTTGTTCGGAAAGGTTTGAGGAGGCATGATGATCCAGAGAAGTGCGCCAGAGACCTAGTTATGGAGGCATTACGCCTCAACACATTCGACAATCTGACAGTGATCATT 333 0.4865 RVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGAPSPLIAEPEFRQMVLTEDDEFLIIGCDGIWDVMTSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVII 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme312280g00001 111 Pfam Protein phosphatase 2C 1 106 IPR001932 -
Trme312280g00001 111 Gene3D - 1 111 IPR036457 -
Trme312280g00001 111 PANTHER PROTEIN PHOSPHATASE 2C 1 111 IPR015655 GO:0004722|GO:0006470
Trme312280g00001 111 ProSiteProfiles PPM-type phosphatase domain profile. 1 111 IPR001932 -
Trme312280g00001 111 CDD PP2Cc 1 111 IPR001932 -
Trme312280g00001 111 SUPERFAMILY PP2C-like 1 111 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme312280g00001 Trme-Chr312280 2 334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme312280g00001 1 111 PP2C-type Phosphatase Gene Family AT3G62260 71.429 1.17e-56 175