Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31213g00001 ATGTGTAGATCAGGAGCAAAGGTTGTGACTATTGATGTACGAGAAGCCAAGAATCTCATCCAGACCGATCACATTTATCTTGATGTTAGGACGGTGGAAGAATTTGCGAAAGGGCATGTAGATGCAGCTAAGATCATTAACATTCCATACATGTTGGATACACCTAAGGGCAGGGTGAAGAACCCAGATTTTCTAAAGGAGATTTCATCTGTTTGCAATAAAGAAGATCATCTCGTCGTG 240 0.4125 MCRSGAKVVTIDVREAKNLIQTDHIYLDVRTVEEFAKGHVDAAKIINIPYMLDTPKGRVKNPDFLKEISSVCNKEDHLVV 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31213g00001 80 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 7 80 IPR036873 -
Trme31213g00001 80 CDD RHOD 15 80 - -
Trme31213g00001 80 Pfam Rhodanese-like domain 14 80 IPR001763 -
Trme31213g00001 80 Gene3D - 2 80 IPR036873 -
Trme31213g00001 80 ProSiteProfiles Rhodanese domain profile. 20 80 IPR001763 -
Trme31213g00001 80 PANTHER THIOSULFATE SULFURTRANSFERASE 18 3 80 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31213g00001 Trme-Chr31213 19 451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31213g00001 7 80 Sulfurtransferasese or Rhodanese AT5G66170 58.108 6.37e-30 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31213g00001 - K15692 aip:107642568 133.265