Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme311g00001 CCAGAAACCTACACTCCTGCAGAATTTCAGCAAGGAAGTCTAGTTGCCATTGAATTAAAATATAGTAAGCTCAAACAACTTTGGAACAAGAGCCAGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCTGGATTTNNNNNNNNNNANNNNNTTTTCCTACTTGCCTAATCTTGAAAAGCTGGTACTCAAAGACTGTCCAAGTCTTCAGACACTTCCGAAAAGCATCTATAAATTGAAGTCTCTAGAAACTTTGATTCTTTCAGGATGCTCCAAGATTGATAAATTGGAGGAGGATTTAGAGCAGATGGAATCATTGATTAACTTGATTGCGGATAAGACTGCTATAACAAAAGTTCCATTTTCAATAGTAAGATTGAAAAGCATTGGATATATTTCTTTAAGTGGCTTTGAAGGATTTTCTCGTGATGTATTCCCCTCTCTCATTCGGTCTTGGATGTCGCCATCAAATAATGTGATATCCCTTGTTCAATCATCAGCGTCCATGTCACCACTTAGTATTTCAAAAGACCTTCAAAAACATCGAATTCTTTGTGCGGAATGTGATTCAGATTTACAACTAACTCAAGATATAGCACGATTTTTGGATGTATTAAAAGCCACAAATTGTCAGAACTTGGAAGCAAGTGCAAGTTCAACTACATCAGGGATCTCTGATATGTATGCTTCTCCCTTAATTGGTGATTGCCTTGGTCATGTTCCCACTTTAGGGTCAAAAAATCACTTGAAATCTCTCTTAATTCAAATGGGAACAAAATGCCAAATCTCTAATGTTGTTGAAGACAGTGTTTTACAGAGCATAACCTCAAATCTAGAACCTGGTAACAAAGTGGGGGTTATTGTTGTTTTTGGGGAGGGTTTCATTGTTGAGAAGACTAGAGTATCTCTCTTATATGATGAACCAGTCGACACAGAAATGGAAAGTTGTGATGCAGTAGACGAGGAGGATGTTATTGTTTCTGGCAATGATGATAATAATGTTAGTGTTTCTGGTGGTGATAATGAAGCCATCAATCACTTTGAAGAGGAAACAGCGGACCACATGCAGATCATCAAACATGCTGATGGGTTATATGCTGATGCTGTGGGAGCAGTACAGCTAGTACTACCAGATGACCCTGACCAGCTTGCCCAGGAAGTAGCTGAAGAGTTTCCTGAACAGATTCCTCCACCTGAGGGTCAGCCTGAGCAGCAGGCAGCAGCAGCACCTGAGGCCATTGGGTCAGCCTTAGGAACTCAGATTTTGGATGCCCTCAGAGAGCTGAGGGCTGATTTCATCTGA 1308 0.3953 PETYTPAEFQQGSLVAIELKYSKLKQLWNKSQMLENLKILNLSHSLDXXXXXXFSYLPNLEKLVLKDCPSLQTLPKSIYKLKSLETLILSGCSKIDKLEEDLEQMESLINLIADKTAITKVPFSIVRLKSIGYISLSGFEGFSRDVFPSLIRSWMSPSNNVISLVQSSASMSPLSISKDLQKHRILCAECDSDLQLTQDIARFLDVLKATNCQNLEASASSTTSGISDMYASPLIGDCLGHVPTLGSKNHLKSLLIQMGTKCQISNVVEDSVLQSITSNLEPGNKVGVIVVFGEGFIVEKTRVSLLYDEPVDTEMESCDAVDEEDVIVSGNDDNNVSVSGGDNEAINHFEEETADHMQIIKHADGLYADAVGAVQLVLPDDPDQLAQEVAEEFPEQIPPPEGQPEQQAAAAPEAIGSALGTQILDALRELRADFI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme311g00001 435 Coils Coil 95 115 - -
Trme311g00001 435 MobiDBLite consensus disorder prediction 395 414 - -
Trme311g00001 435 SUPERFAMILY L domain-like 12 222 - -
Trme311g00001 435 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 240 IPR044974 GO:0006952
Trme311g00001 435 Gene3D Ribonuclease Inhibitor 9 182 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme311g00001 Trme-Chr311 2 2187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme311g00001 1 127 WRKY Transcription Factor Family AT5G45050 35.433 8.01e-11 62.4