Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31197g00001 ATGTATCATAGAAAGCAGAGGGATAGAGGCTGTTGTTCTTCTCGTGCAACGATGCTTAAGTCTTGTTGCTGGAGTGGTAAAGGAGACTGGGAAGGTTCCAATGTTCTCTTATTTTATGGTCTGTGGGGCTTAGCTGAATTTCTTCATCAGTGTGGCCTTTTACAAGACAATCCTCAGCAATTTACTAGAGAGGTGACAAACATTAAAACTCAGTTAGTTGACAAACTTCATGAGATCTGTAGTAGCACCTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTACGGTTTCCCAAATGAATATTCCAAAAGGATTGGGATATCTTTTAATAAGGAAGAATATGCAGATTTGCGACTCATTGTAGCAAATGGGGATTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCAATTCTACCTTCTAAAGTGTTATCTAGTAGTAAGAGTTCTAAACAAATAACAGATAATTTTGTTGGAGAGACCGTGCGAGAAGTTCGCTATTCTTCTCACGTTGATTATGAAGCATTGTTGTTATTGTTGGAATATGTATATCTGGGGCGCTTGCATGCAGCAGAAGAAGAAACTGTGAAGAAGCTCAAAATTCTTGCTAAGCGTTGCAATCTACAGCCTCTCTTGCAAATGCTTTGCAGACAATCTCCAAAGTGGGGCACACCTTTCCCCAGCTTTAATCTTACTTCATCTCTTGATCCAGCTGGAAGTTATTTTTCGTATGGTTTGCTTCTTGACCAGATTCTTCTAGATATCTAG 801 0.3895 MYHRKQRDRGCCSSRATMLKSCCWSGKGDWEGSNVLLFYGLWGLAEFLHQCGLLQDNPQQFTREVTNIKTQLVDKLHEICSSTSFSPGVKWYVSYILSYFGFYGFPNEYSKRIGISFNKEEYADLRLIVANGDSVSVHGVILAVRCPSILPSKVLSSSKSSKQITDNFVGETVREVRYSSHVDYEALLLLLEYVYLGRLHAAEEETVKKLKILAKRCNLQPLLQMLCRQSPKWGTPFPSFNLTSSLDPAGSYFSYGLLLDQILLDI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31197g00001 266 ProSiteProfiles BTB domain profile. 123 203 IPR000210 GO:0005515
Trme31197g00001 266 Pfam BTB/POZ domain 117 225 IPR000210 GO:0005515
Trme31197g00001 266 SMART BTB_4 123 234 IPR000210 GO:0005515
Trme31197g00001 266 Gene3D Potassium Channel Kv1.1; Chain A 106 230 IPR011333 -
Trme31197g00001 266 SUPERFAMILY POZ domain 101 227 IPR011333 -
Trme31197g00001 266 PANTHER OS06G0674800 PROTEIN 20 254 IPR044953 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme31197g00001 BTB 5.9e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31197g00001 - - mtr:25487018 419.853