Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3117g00001 ATGAAATTGAAAGATTTGGTATGCAAAATGAAAGAAGGATTATCAGAATTTAATGACGTTGTTCCAAAAATATTTGAAGAAAAGGAGAACGATAATTTGTCATTGATATCTGAGTGCTTGAAACAAGCTATTAACTCTCATGCCGAGCTTCCGAAGAATATATTTAAATTTACTAGTTGGTGTAGGTTACCATTATATGAACTAGATTTTGGATGGGGAAAACCAACATGGGTCACTACTTCTGGTAGTTCTTCGAAGAATTTAATAGTTTTAATGGATACGGAAGATGGAATTGGGATTGAAGCGATCGTGAACTTGGAAGAGAATGTTATGGCTAAATTTGAGAATGAAGTGGAGCTTCTTCAATATGCTTCTCTTAATTTATCCAAGCAATCTTGGCGGACACAAGGCCGATCCAACGCATATTAA 429 0.3497 MKLKDLVCKMKEGLSEFNDVVPKIFEEKENDNLSLISECLKQAINSHAELPKNIFKFTSWCRLPLYELDFGWGKPTWVTTSGSSSKNLIVLMDTEDGIGIEAIVNLEENVMAKFENEVELLQYASLNLSKQSWRTQGRSNAY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3117g00001 142 Gene3D - 1 126 IPR023213 -
Trme3117g00001 142 PANTHER F21J9.9 5 125 - -
Trme3117g00001 142 Pfam Transferase family 43 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3117g00001 Trme-Chr3117 1318 1746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3117g00001 58 115 Monolignol Biosynthesis Gene Families AT5G48930 36.667 1.20e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3117g00001 - - cam:101507620 154.066