Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31138g00001 GTGCCAATACCTCCTGTTCCGAAGCAGCAGCAACCACCTAGGAATGATGCAGGTGTAACTGAGAAATCTAATGCCAGGGAGACTCATCTAGGGGCTAAGGCTAAAAAGGATCCTCAGGTGCCAGTTTTGACCCCAGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCCTGTAACTGGGATTTCAATGTCAACACCATTTCAGCAGCAGTCACAGGCACCTTTACAGTTTGGCGGTCCTAATCCACAGATTCAATCTCAGGGGATGTCCTCGACACCCCTCCATATTCCTATACCAATGCCTATACCAATTGGAAATGTTCCACAAGTGCAACAGCCGGTTTTTGTTCCAGGTCTTCAGCCTCATCCAATGCACCCTCATGGGATCATGCATTCAGGCCATAACATAAGTTTCNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCCCTCAATATCCCCAGCAGCAAGGTGGAAAATTTACTGGTCCTCGAAAAACTACTCCTGTCAAGATAACTCATCCTGATACACATGAAGAGCTGAGGCTTGATAAAAGGACAGATGGATATTCAGATGGGGGGTCATCTGGTGCTAGGTCGCATCCTAATGTACCTTCTCAATCTCAACCTGTCAAATCCATTGCCACTTCTCAGCCTACAAATTATTATCCTTCCAGCTCATATGGTTCCARTTCTCCCTATTATCAACCTAATTCTCTTCCATTAACAAGTAGCCAGATAACTCCCAATGCTCAGCCACCAATATTTAATTATCCTGTGAACAATGGTCCACAAAATGTGGCTTTCATGAATTCGCCGTCTCTTAATTCTCAGCCTGTTAATAAAGTCAGCACTCCTATTCCTCGCATTGCTGAACCCCCCACTGTAGAACGTTCTCGTGAAGTGCCTAATGTGATATCATCAGCTCCAACGGGGGTTGCTTCTGTGACTATTAAACCAAGTGGTGTGTCTGCTGTTGCGGACTCATCATTGACTAATTCTAGTATATGTGGTGTTCAAAATACCGAGACTCCCAGTTCAGCAGCATCTTGCGATACTAGCCCCCCTTTACCACAAAAAGGATCTGAAACTTTCTCGGAAATCTCTACAGGAAAATCTAAATCTTCTGAGGATTCT 1158 0.4266 VPIPPVPKQQQPPRNDAGVTEKSNARETHLGAKAKKDPQVPVLTPASQMQKPSVVPVTGISMSTPFQQQSQAPLQFGGPNPQIQSQGMSSTPLHIPIPMPIPIGNVPQVQQPVFVPGLQPHPMHPHGIMHSGHNISFXXXXXXXXXXXXXXXXXXXXPQYPQQQGGKFTGPRKTTPVKITHPDTHEELRLDKRTDGYSDGGSSGARSHPNVPSQSQPVKSIATSQPTNYYPSSSYGSXSPYYQPNSLPLTSSQITPNAQPPIFNYPVNNGPQNVAFMNSPSLNSQPVNKVSTPIPRIAEPPTVERSREVPNVISSAPTGVASVTIKPSGVSAVADSSLTNSSICGVQNTETPSSAASCDTSPPLPQKGSETFSEISTGKSKSSEDS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31138g00001 386 MobiDBLite consensus disorder prediction 147 255 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 337 379 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 1 48 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 70 92 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 20 34 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 70 96 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 337 386 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 113 134 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 178 196 - -
Trme31138g00001 386 MobiDBLite consensus disorder prediction 200 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31138g00001 Trme-Chr31138 1 1158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31138g00001 6 331 Eukaryotic Initiation Factors Gene Family AT3G60240 40.000 7.65e-54 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31138g00001 K03260 - gmx:100798562 437.187