Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme311044g00001 | TCTCAGTGGCAGGAACTTGAACATCAAGCTTTGATCTTTAAATATATGGTTGCTGGTCTTCCTGTTCCACCTGATCTTGTCCTTCCCATTCAGACTACTACCTTTCACTCCAACAATTTCTTTCATCATCCTATTCCCACCTATGAGATGGTATTTTACCTTAACCAAGGTCTTGAGTTCGATTCCTGA | 189 | 0.4074 | SQWQELEHQALIFKYMVAGLPVPPDLVLPIQTTTFHSNNFFHHPIPTYEMVFYLNQGLEFDS | 62 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme311044g00001 | 62 | SMART | QLQ_2 | 1 | 32 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
| Trme311044g00001 | 62 | ProSiteProfiles | QLQ domain profile. | 1 | 32 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
| Trme311044g00001 | 62 | Pfam | QLQ | 1 | 31 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
| Trme311044g00001 | 62 | PANTHER | GROWTH-REGULATING FACTOR 5 | 1 | 44 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme311044g00001 | Trme-Chr311044 | 2 | 337 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme311044g00001 | 1 | 57 | GRF Transcription Factor Family | AT2G36400 | 46.774 | 1.47e-12 | 58.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme311044g00001 | - | - | vvo:131606650 | 84.3445 |