Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme310730g00001 ATGGATGTCGTGATTCCTAAAAATTCTACCATTCCAATAATGAAGACGCAATATTACTTCACATGTTCTGATAACCAATCATGTGTCTTGGTTGATGTTTATGAGGGTGAGAGAGTGATAGCCGAAGATAACAACTTGCTAGGTTCGTTTGATTTTTCAGTTCCTTGTGCTCCTCGAGGCCATATTCCTATCAAAGTATGTTTTGCTATAGATGCTGATG 220 0.3818 MDVVIPKNSTIPIMKTQYYFTCSDNQSCVLVDVYEGERVIAEDNNLLGSFDFSVPCAPRGHIPIKVCFAIDAD 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme310730g00001 73 PANTHER HEAT SHOCK PROTEIN 70KDA 1 73 IPR013126 GO:0005524|GO:0140662
Trme310730g00001 73 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 73 IPR029047 -
Trme310730g00001 73 Pfam Hsp70 protein 2 73 IPR013126 GO:0005524|GO:0140662
Trme310730g00001 73 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 73 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme310730g00001 Trme-Chr310730 20 239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme310730g00001 1 73 Calmodulin-binding Proteins AT3G12580 58.108 1.37e-22 87.4