Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30g00001 ATGTCCTCATCGTCGTCCACTAATCTTTCAGGTTTTGGGAAGCCGTCTTCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGCTTGGATGTCATTCTATACGCTCCATCTGGAACAGGGAAGTCGGCAACATTCTGTATTGGAATTTTGCAGAAGCTTGATTATGGATTGGTTCAGTGTCAGGCTTTGG 193 0.4508 MSSSSSTNLSGFGKPSSIQQRGIVPFCKGLDVILYAPSGTGKSATFCIGILQKLDYGLVQCQAL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30g00001 64 Gene3D - 2 64 IPR027417 -
Trme30g00001 64 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 63 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30g00001 Trme-Chr30 1 1293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30g00001 11 64 Eukaryotic Initiation Factors Gene Family AT3G13920 77.778 3.39e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30g00001 K03257 - mus:103976441 96.6709