Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme309003g00001 ATGAAATCATTTAGAAAAGCATTAGATATTGAGCCAAACCATGTGGAAAGTTTGATATCAACAGCTTGTGTTCTGAGAAAACTTGGTTGTCAATCATCATCTTCAATTGTTAGAAGCCTTCTCACTGAAGCATTAAGGCTTGACAGAACAAATTCATCTGCATGGTACAATCTTGGACTTCTCTACAAAGCTGATTTGGGGACATCAGCATTGGAAGCTGCTGAATGCTTTGAAGCAGCTGTTTTTCTTGAAGAATCTTCTCCCATTGAACCCTTTAGATAA 282 0.3759 MKSFRKALDIEPNHVESLISTACVLRKLGCQSSSSIVRSLLTEALRLDRTNSSAWYNLGLLYKADLGTSALEAAECFEAAVFLEESSPIEPFR 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme309003g00001 93 Gene3D - 1 88 - -
Trme309003g00001 93 PANTHER PROTEIN NPG1 1 93 IPR043376 -
Trme309003g00001 93 SUPERFAMILY TPR-like 2 83 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme309003g00001 1 93 Calmodulin-binding Proteins AT4G28600 56.383 6.37e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme309003g00001 K21843 - gmx:100789469 158.303