Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30830g00001 ATGGTTGATAAAGCTGTTGCTCTTCTGTCAAACCTGTCGACAATTTCAGAGGGCAGGTTAGAAATTGCAAGAGAAGGCGGCATCCCTTCATTAGTTGAAATTGTTGAATCGGGTTCTCAGAGGGGAAAGGAAAATGCCGCCTCCATTCTCTTACAATTATGTCTTCATAGTTCCAGGTTTTGTACACTTGTTTTACAAGAAGGAGCTGTACCTCCTCTGGTTGCATTATCTCAATCTGGTACACCAAGGGCAAAGGAAAAGGTATCGAACTTATCATTCTTCGCCTTTCCTATCCTTATCAGTGGAAACAAGAAACAAACCGCACTATGA 330 0.4212 MVDKAVALLSNLSTISEGRLEIAREGGIPSLVEIVESGSQRGKENAASILLQLCLHSSRFCTLVLQEGAVPPLVALSQSGTPRAKEKVSNLSFFAFPILISGNKKQTAL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30830g00001 109 Gene3D - 1 97 IPR011989 -
Trme30830g00001 109 SUPERFAMILY ARM repeat 4 88 IPR016024 -
Trme30830g00001 109 PANTHER U BOX DOMAIN-CONTAINING 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30830g00001 Trme-Chr30830 758 1087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30830g00001 1 91 U-box Gene Family AT3G54790 78.022 1.08e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30830g00001 - - mtr:25484253 165.622