Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3080g00001 ATGAGAAATGTTCCTGTTGGTGCTGGTCGCCGCAAGAACAAGAACTTATCTAGCTCGCATTATCGACACTTGATGATTCCAGAGGCTGCTAAATTTAATTCCCCTAATGGATTACATATGGGAAATGGAGCAGCTGTGTTGGCGTTTGATTCAGGTTCACCGCTTTGTAATACCATGGCTTCTGTGTTGAACATTGCTGAGAGAACACAGAATTGTGTGCCAAATGGTTTTCATCATGCAAATTCCTATGGTGGGGAAAATGGTCACTCGAACGCAGTTTCGGTTACAACTTCAACTTCATCAGAGAGGAAACGCCACACCGACACAAATGGATCAGTGGATAAAAGAGTTGAAGGTTTCCCTCCTCAATTGCAATATATTCCAAGTCCCCTTTTGCCTTATCCATGGAGTTCTGCAATGCCTCCTCCTGCATTTTGTCCACCAAACTATCCATTAGCATTCTATACTCCAGTAACTCCACCTGCATATTGGGGTTGTGTGCCACCGCCATGGAATATGCCATGTATCTCATCAGAAAGTGCTTCTGTTAACCACAGTGACTCTGCTCATAGTTCTGCCCCATATTCACCTACTTTGGGGAAACATTCAAGAGATGGAAACATCATTACCTCAGTCAACTCACAAAAAGAAAAGTCGGATAACGAACACAATAATACCGAAAGCAGCGTTTTGATCCCGAAAACACTTAGATTTGACGACCCAAATGAAGCTGCAAAGAGTTCATTATGGTCAAAGCATGGGATCAATAATGACAAAGCCAATTCTATCAATGGAGGAGGCATGTTCAATGGATTTCAATCCAAAGGAAAGGACATGAATCACTCGGTTGAGGCGTCGCCGCTGATGTATGCCAACCCTGCAGCTTTATCGCGGTCCCGTACCTTCCACGAGGGAACCTAA 921 0.4397 MRNVPVGAGRRKNKNLSSSHYRHLMIPEAAKFNSPNGLHMGNGAAVLAFDSGSPLCNTMASVLNIAERTQNCVPNGFHHANSYGGENGHSNAVSVTTSTSSERKRHTDTNGSVDKRVEGFPPQLQYIPSPLLPYPWSSAMPPPAFCPPNYPLAFYTPVTPPAYWGCVPPPWNMPCISSESASVNHSDSAHSSAPYSPTLGKHSRDGNIITSVNSQKEKSDNEHNNTESSVLIPKTLRFDDPNEAAKSSLWSKHGINNDKANSINGGGMFNGFQSKGKDMNHSVEASPLMYANPAALSRSRTFHEGT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3080g00001 306 MobiDBLite consensus disorder prediction 84 100 - -
Trme3080g00001 306 MobiDBLite consensus disorder prediction 179 206 - -
Trme3080g00001 306 PANTHER CYCLIC DOF FACTOR 2 1 305 IPR045174 GO:0003700|GO:0006355
Trme3080g00001 306 MobiDBLite consensus disorder prediction 83 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3080g00001 Trme-Chr3080 1497 2417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3080g00001 1 304 C2C2-Dof Transcription Factor Family AT5G39660 36.025 1.59e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3080g00001 - - gmx:100813315 333.569