Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30805g00001 ATGATAGAACCTGTTAAAATAGAGGAATGGGCTGTGGTAAACTTTTCTTCTCGTTTAAATCCGAGTGAACTTGCGGCAGAGTTGATTACATGTGGAAAAAGCAACGGAATTCTTGCGGAACAACCATTTGGTTTTTTTGAAGAAACTCATCAGGTTAAGGTTTTATCACCTTCGGAAAGAGTTAAGAAAATGTTAGATAAAGTCCTGAAAGAAAAAACTCCTAAGTTTTTGCTTTGTCTGCTTCGTGAGAACAATAATATATATGGTCCATGGAAGAAGGCATGTCTTGCTGATCATGGAATTTTTGCACAGTGCATAGCTCCTCGAAAAAAGAAGACCGTAAACAAGCAGTATCTGGCAAATGTTTTGCTGAAGATAAATGTTAAGCTTGGTGGAATGAATTCTCTGTTGGCTAAAGAACTTTCTGAAGTTATGCCTATTGTATCCCAAGCTCCCACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCACCTGGGCAAACTGACATTCC 512 0.3867 MIEPVKIEEWAVVNFSSRLNPSELAAELITCGKSNGILAEQPFGFFEETHQVKVLSPSERVKKMLDKVLKEKTPKFLLCLLRENNNIYGPWKKACLADHGIFAQCIAPRKKKTVNKQYLANVLLKINVKLGGMNSLLAKELSEVMPIVSQAPTLILGMDVSHGSPGQTDIP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30805g00001 171 Gene3D - 1 137 - -
Trme30805g00001 171 SUPERFAMILY Ribonuclease H-like 61 167 IPR012337 -
Trme30805g00001 171 ProSiteProfiles Piwi domain profile. 76 171 IPR003165 GO:0003676
Trme30805g00001 171 Pfam Piwi domain 77 168 IPR003165 GO:0003676
Trme30805g00001 171 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30805g00001 Trme-Chr30805 373 1164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30805g00001 1 171 Eukaryotic Initiation Factors Gene Family AT1G48410 33.889 9.30e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30805g00001 K11593 - sly:101256023 197.593