Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30697g00001 ATGGACAAAGCCACATTACTTGCTAAAGTGATTAGTSAAGTGAAGGAATTGAAGMAGAATGCAATGGAAGCAAGCAAAGGTTTTCTCATTCCAATGGAAGATGATGAAGTGAAAGTTGAACCATATGATATTGAATTAGGATATGGATGCATGTCTTACAAGGCAACTATCTGCTGTGATTATCAACCTGAGATATTATCTGACCTCAAAAAAGCACTTGATGAACTTCAACTTCAACTAGTGAAGGTAGAAATCTCAACATTGGAAAATAGGATGAAGAATGTGTTTGTCTTTACATGTTGCAAAGGGGATAATAGTGTTAATGTTGAAGCATGTCAAAGTATTGTAAATGTTGTTCATAAAGCACTAGATTCTGTGTTGGAAAAGGCTTATACTTCAATGGAGTTTTCACTTAGAACTTCATATCCAAACAAGAGGAGAAGAATGTGCTTTGCTGAAACATCTACTTCCTCATGCAATCATGGATCTTGTTGCTCATGCTAA 504 0.3532 MDKATLLAKVISZVKELKXNAMEASKGFLIPMEDDEVKVEPYDIELGYGCMSYKATICCDYQPEILSDLKKALDELQLQLVKVEISTLENRMKNVFVFTCCKGDNSVNVEACQSIVNVVHKALDSVLEKAYTSMEFSLRTSYPNKRRRMCFAETSTSSCNHGSCCSC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30697g00001 167 Coils Coil 66 86 - -
Trme30697g00001 167 CDD ACT_UUR-ACR-like 56 123 - -
Trme30697g00001 167 PANTHER TRANSCRIPTION FACTOR BHLH30 1 151 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30697g00001 Trme-Chr30697 353 856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30697g00001 1 111 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 37.719 4.21e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30697g00001 - - psat:127107084 253.832