Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30656g00001 TATTTTGATACTCAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTTAATAGAGGCTTAGGGTCCATTGAAAAGATATCAAAGACTCAGGTATCAATCAATGTTGCAACATTGTTCATTGGTGGAAAAGACGATAGAGAAGCACTTGCCTATGCCGGTCGCGTAGCAGGGCATCCAGGAGTGAAACTCACAGTTATAAGATTCCTAGTAGATACTAGTGTTGAATCTTCAAGAATTTCGGCATATAGGGTAAGCCTTCCAGATAACGGCGAGGAGATGGGGCTAGACGATGAATGCTTTGCACATTTCTATGATAAATATATTTCTGGAGGTCGAATTTCATATATGGAGAAGCATCTTGCTAATGCAGCTGAGACTTTCTCTACTCTTAGATCATTTGAAGGACAGTACTCACTGGTCATTGTAGGAAGAGAAGGTGGACTAAACTCGATATTGACAAAGGGAATGAATGATTGGCAACAGTGTCCGGAACTTGGACCGATAGGGGATGTTCTTTCAGGACCGGACTTCTCAAAAACAGTGTCGGTGTTAGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGACTTGATGAAGAATTCAATATCATGTAG 624 0.4087 YFDTQLLKSAPCSVGILVNRGLGSIEKISKTQVSINVATLFIGGKDDREALAYAGRVAGHPGVKLTVIRFLVDTSVESSRISAYRVSLPDNGEEMGLDDECFAHFYDKYISGGRISYMEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKHKGEIDGLDEEFNIM 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30656g00001 207 PANTHER CATION/H + ANTIPORTER 5 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30656g00001 Trme-Chr30656 260 883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30656g00001 1 207 Antiporter Super Family AT3G52080 55.189 1.37e-74 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30656g00001 K26731 - gmx:100815945 340.117