Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme305g00001 ATGGATGGTGGGATCTTGATTAGAGTAGCAAAGCCATACAAAGTGCAAGGTAATCGGAGCAAATACTTCAGCCTTGANTCAACTGGTCCAACCATCCAAAACCGGAGTCCAGTAAACGATCAAGGTCATGTCACTCACACGTCGTCCACCACAACGGCTGGACCAGTAGTGAAGGGTGCAAGTCTTTACAGCATTGGTGAAGGCACTGCCCGTGGAGGTGTCCCATCAGCACGCATTGCAATGTACTCATACAAGGTTTTTTGTTGGAGAATCGGATACAGTGACATGGACATGCTTGCTGGCTTTGATGAGGCCATTGGTGGTCCCTCACGTGGCTTTTTCTCTAAACCAATTGATATTGGAACATTTCATTCTCTGAGGAGGAGAGGTCTTCTCACTTCTTGCTCTGCTGGAAATGATGGTTGTCTACCTATATCTGTTGAGAATGTTGCTATTTGGATTATGACTATTGCAGCTTCCACCGTTGATAGACAGTTCACCACACTAGTTTCCTTTGGTGGTGATAGTATTTATTTAGGGCCGGAAATTGTGCAACTGAAATTAACTCTGGGAGCAGCAGCAACTGCAAGAGATTGTGCATTGCATCTCTTGATTCTTGAGCTTTGCAGATTTGGTATTGTATCATACTTCTCTTTTGCACTTTGTAACTATGCCAATGGTAGATGGCACTTTGCTATTAGTCTACTTTGCTCATGGGTTTCAAAATAA 729 0.4376 MDGGILIRVAKPYKVQGNRSKYFSLXSTGPTIQNRSPVNDQGHVTHTSSTTTAGPVVKGASLYSIGEGTARGGVPSARIAMYSYKVFCWRIGYSDMDMLAGFDEAIGGPSRGFFSKPIDIGTFHSLRRRGLLTSCSAGNDGCLPISVENVAIWIMTIAASTVDRQFTTLVSFGGDSIYLGPEIVQLKLTLGAAATARDCALHLLILELCRFGIVSYFSFALCNYANGRWHFAISLLCSWVSK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme305g00001 242 Gene3D - 163 191 - -
Trme305g00001 242 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 180 IPR045051 -
Trme305g00001 242 SUPERFAMILY Subtilisin-like 16 177 IPR036852 GO:0004252|GO:0006508
Trme305g00001 242 Gene3D Peptidase S8/S53 domain 27 162 IPR036852 GO:0004252|GO:0006508
Trme305g00001 242 MobiDBLite consensus disorder prediction 33 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme305g00001 Trme-Chr305 1096 2336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme305g00001 20 173 Subtilisin-like Serine Gene Family AT5G03620 51.807 1.58e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme305g00001 - - vvo:131615236 207.994