Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30528g00001 GGGGATGACATGAAGGAGGCTGCTGATCAGTCACTGAAAGCATATCAGGTAGCTTCTACTGCTGCAGAGACTAAGTTACCTCCCACACATCCTGTCATACTGGGTTTGGCTTTGAACATCTATGTCTTCTATTATGAAATCTTGAACTCTCCAGAAAGGGCTTGTCACCTTGCCAAGAAAGCATTTGATGTAGCAATCTCTGAGTTGGATTCCCTCAATGAGGAATCTTTCAAAGACATCACACTGATCATGCAGCTTTTGAGGGACAACCTCACATTGTGGACTTCTTAA 291 0.4364 GDDMKEAADQSLKAYQVASTAAETKLPPTHPVILGLALNIYVFYYEILNSPERACHLAKKAFDVAISELDSLNEESFKDITLIMQLLRDNLTLWTS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30528g00001 96 PRINTS 14-3-3 protein zeta signature 14 40 IPR000308 -
Trme30528g00001 96 PRINTS 14-3-3 protein zeta signature 41 67 IPR000308 -
Trme30528g00001 96 PRINTS 14-3-3 protein zeta signature 68 96 IPR000308 -
Trme30528g00001 96 SMART 1433_4 1 96 IPR023410 -
Trme30528g00001 96 Pfam 14-3-3 protein 2 95 IPR023410 -
Trme30528g00001 96 SUPERFAMILY 14-3-3 protein 1 96 IPR036815 -
Trme30528g00001 96 Gene3D - 1 96 IPR036815 -
Trme30528g00001 96 PANTHER 14-3-3 PROTEIN 2 96 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30528g00001 Trme-Chr30528 2 292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30528g00001 1 96 14-3-3 family AT2G42590 81.250 2.96e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30528g00001 K06630 - apan:127242684 163.31