Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30513g00001 GATAACAAGGATAAGGAGGTGTCTAGTTTACGCCAGATGCAGTTGGATGTGGATTCATTAGGCCCTTCTCTTTCCCTAGAACAGCTATTTAGTATCCACGACTTTTCTCCAGATTGGGCATATGCTGGGGTTAGAACAAAGGTTTTAATAGTTGGCACATTTCTGGGGAGTAAAAAGCTTTCTGGTGAGACCAAATGGGGATGTATGTTCGGCGAAATTGAGGTTTCTGCTGAAGTTTTGGCAGAGAATGTCATACGCTGTCAGACTCCTTTGCATTCACCTGGTCGTGTTCCATTCTATGTTACATGCAGTAATCGGTTAGCCTGTAGTGAGGTCAGAGAATTTGAATATCATGACAATCCATCAAAATTTATAGGTCCCAACGGTGTTAAAATCTCACCAGAAGATGAGGTACAACTTCAAATTCGACTTCTTAGACTGGTAGAACTGGAACCTGACAACAAGTGGTTCAAGTGCTCAGTTCCTGAATGTGAAAAATGTAAACTTATGGAAACAATGTATTCCGTGAGAGATGATAGTGGAGTATTTGGAGAAACTTTCAAGATTGATGGAAGTGATCACAATAACACTAGAGATGTATTGTTTCAGAGATTAATCAGAGACAAGCTTTATGGCTGGTTGGAATTTAAGGTTCATGAAGGAGGAAAAGGACAACATATATTGGATAATGAAGGCCAAGGAGTCATACATTTGGCAGCTGCACTTGGATATGTATGGGCTCTGGGGCCATTAGTTGCCGCTGGTATCAGTCCTAACTATAGGGATGCTCATGGAAAAACAGGACTTCACTGGGCTTCATATTTTGGGAGGTCTGGTTGCTAG 843 0.4152 DNKDKEVSSLRQMQLDVDSLGPSLSLEQLFSIHDFSPDWAYAGVRTKVLIVGTFLGSKKLSGETKWGCMFGEIEVSAEVLAENVIRCQTPLHSPGRVPFYVTCSNRLACSEVREFEYHDNPSKFIGPNGVKISPEDEVQLQIRLLRLVELEPDNKWFKCSVPECEKCKLMETMYSVRDDSGVFGETFKIDGSDHNNTRDVLFQRLIRDKLYGWLEFKVHEGGKGQHILDNEGQGVIHLAAALGYVWALGPLVAAGISPNYRDAHGKTGLHWASYFGRSGC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30513g00001 280 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 9 278 - -
Trme30513g00001 280 SUPERFAMILY Ankyrin repeat 223 278 IPR036770 -
Trme30513g00001 280 Gene3D - 213 280 IPR036770 -
Trme30513g00001 280 Gene3D Immunoglobulins 25 123 IPR013783 -
Trme30513g00001 280 FunFam Calmodulin-binding transcription activator 2 25 122 - -
Trme30513g00001 280 CDD IPT 31 119 - -
Trme30513g00001 280 Pfam IPT/TIG domain 32 117 IPR002909 -
Trme30513g00001 280 SUPERFAMILY E set domains 32 117 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30513g00001 Trme-Chr30513 2 951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30513g00001 20 277 CAMTA Transcription Factor Family AT2G22300 41.923 5.59e-65 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30513g00001 K21596 - gmx:100818336 489.189