Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30497g00001 GGTGGTGAAATTAATGATTTACCTGGATTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCCAAGGTGAGGTCTGATATTCATAAGCTTCATCCTCTCATTGATGAGTTCATCCCTACTCTTGAAGGAGAGAATGGAATTTGTTATACTCATCCAGAGAAATTGCCAG 193 0.4041 GGEINDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLP 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30497g00001 64 ProSiteProfiles NAC domain profile. 10 64 IPR003441 GO:0003677|GO:0006355
Trme30497g00001 64 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 64 IPR044799 GO:0003700
Trme30497g00001 64 Pfam No apical meristem (NAM) protein 11 64 IPR003441 GO:0003677|GO:0006355
Trme30497g00001 64 SUPERFAMILY NAC domain 6 64 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30497g00001 Trme-Chr30497 615 807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30497g00001 2 64 NAC Transcription Factor Family AT1G28470 85.714 5.81e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30497g00001 - - gmx:100795895 134.035