Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30491g00001 GTTGGAGACATTGCGATTGTGACGAACCGAACAAAGATTGCGGACTTTTCTCAACCTTTTGCATCATCTAGCCTTGTTATAGTGGCTCCTATCAACAGTTCAAAATCAAATGCCTGGGTATTCCTCAAACCATTCTCAGCAGATATGTGGTGTATCATTGGTGCATCATTTCTCATGATTGGAGTTGTTATATGGATTCTTGAACACCGAGTCAACGATGACTTCCGTGGTCCTCCTAAGAGACAAGTTGTCACAATATTTATGTAA 267 0.4082 VGDIAIVTNRTKIADFSQPFASSSLVIVAPINSSKSNAWVFLKPFSADMWCIIGASFLMIGVVIWILEHRVNDDFRGPPKRQVVTIFM 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30491g00001 88 Gene3D - 33 86 - -
Trme30491g00001 88 SUPERFAMILY Periplasmic binding protein-like II 1 55 - -
Trme30491g00001 88 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 87 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30491g00001 Trme-Chr30491 65 331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30491g00001 1 87 Ion Channels AT1G42540 64.368 1.49e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30491g00001 K05387 - jre:109011613 154.836