Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme304911g00001 ATGAACAAGAGGTCATTCAAGTATGCCTGGGTTCTTGACAAGCTTAAGGCTGAGCGTGAAAGAGGTATCACCATCGATATTGCTTTGTGGAAATTNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNAAGAACATGATTACTGGAACCTCCCAGGCTGATTGTGCTGTCCTTATCATTGACTCCACCACTGGTGGTTTTGAAGCTG 232 0.3319 MNKRSFKYAWVLDKLKAERERGITIDIALWKXXXXXXXXXXXXXXXXXXXXKNMITGTSQADCAVLIIDSTTGGFEA 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme304911g00001 77 Coils Coil 52 53 - -
Trme304911g00001 77 Gene3D - 1 77 IPR027417 -
Trme304911g00001 77 PRINTS GTP-binding elongation factor signature 56 67 IPR000795 GO:0003924|GO:0005525
Trme304911g00001 77 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Trme304911g00001 77 PANTHER TRANSLATION FACTOR 1 77 - -
Trme304911g00001 77 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 73 IPR027417 -
Trme304911g00001 77 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 13 28 IPR031157 -
Trme304911g00001 77 Pfam Elongation factor Tu GTP binding domain 8 73 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme304911g00001 Trme-Chr304911 8 239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme304911g00001 1 77 Eukaryotic Initiation Factors Gene Family AT1G07930 74.026 3.20e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme304911g00001 K03231 - psom:113322829 109.383