Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme304821g00001 | ATGCAGGCTGCTACGGGAACCATAGACTATATCATAGACACAATTTCTGCTGATCATTCTGTGTTGCCACTGCTTGGTCTACTTAAGCTGAATGGGAAGTTGGTCACTGTAGGGTTGCCAAGCAAGCCCCTTGAGCTGCCTGTCTTTCCATTAGTTGCAGGGCGGAAGCTTATAGGGGGGAGCAACTTCGGCGGGATAAAGGAGACTCA | 209 | 0.4976 | MQAATGTIDYIIDTISADHSVLPLLGLLKLNGKLVTVGLPSKPLELPVFPLVAGRKLIGGSNFGGIKET | 69 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme304821g00001 | 69 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 5 | 68 | IPR036291 | - | |
| Trme304821g00001 | 69 | Gene3D | - | 1 | 69 | - | - | |
| Trme304821g00001 | 69 | Pfam | Zinc-binding dehydrogenase | 2 | 66 | IPR013149 | - | |
| Trme304821g00001 | 69 | PANTHER | ALDEHYDE REDUCTASE | 1 | 69 | IPR047109 | GO:0016616 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme304821g00001 | Trme-Chr304821 | 1 | 293 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme304821g00001 | 1 | 69 | Monolignol Biosynthesis Gene Families | AT2G21730 | 65.217 | 5.31e-29 | 103 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme304821g00001 | K00083 | - | gmx:100795575 | 109.768 |