Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30393g00001 ATGATGACAACGAATCCTAAACACGGAGAAGCTTGTCCTCAACAATCTCCATCAGGTGGCGACGACCTGTTTGATATTTTAGGTGTGGATTTTAAAAACAAACTTCTCAAAGGACACTGGAATGAACTGTTTGCCGATGAATCGGATGCCAATGCTGAAAATATGGTTAAAAAGGAAATATGTACGAACAAAGAGGATACAAATTCTGATTATTATTCAGTTAGCGAATCAATGTTGGACAGTGGCATTTTTTCTGGCATGTCAACAGACAACCTCTTGGATGCTGTGGTCTCAAAGGCCAAACGCCCTTTGATACATAATTCCGATGACATGTCTTGCAAGACAACATTGACTGGGAATAGTAGTATCACCTCCGTTCCCTCTCGTGTTTGCAAGCAGGTTATGTCCGGTAATTTTGAAGGGGGTTTGTTTGGTTTTCCGAAGAATGGAGGTAAAACGGGTGCCTTAGAAACTAGTTCTCTAAGATCTGGTTGTAGCAAGGATGATACTGGAAACCTCTCTCAAACGACTACTATATGTGGTTCTCAACTTAGTTCATGGTTGGAGAATGGTGGCAATGTGAAGCATGAAAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGCCCGGACGAAGCTTGCAAACCTAATCGGAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTAGACCTAAAGATCGTCAAATGATTCAAGATCGTGTCAAAGAGTTACGAGAGATTGTTCCAAATGGAGCGAAGTGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGGCTTTCTTACAAAGTGTGACAAAGCACGCCGACAAGCTGAAACAGACCGGGGATTCTAAG 864 0.4259 MMTTNPKHGEACPQQSPSGGDDLFDILGVDFKNKLLKGHWNELFADESDANAENMVKKEICTNKEDTNSDYYSVSESMLDSGIFSGMSTDNLLDAVVSKAKRPLIHNSDDMSCKTTLTGNSSITSVPSRVCKQVMSGNFEGGLFGFPKNGGKTGALETSSLRSGCSKDDTGNLSQTTTICGSQLSSWLENGGNVKHEKRENSVSTGYSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMAFLQSVTKHADKLKQTGDSK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30393g00001 288 MobiDBLite consensus disorder prediction 192 237 - -
Trme30393g00001 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 222 271 IPR011598 GO:0046983
Trme30393g00001 288 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 288 IPR043561 GO:0003700|GO:0006355
Trme30393g00001 288 MobiDBLite consensus disorder prediction 190 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30393g00001 Trme-Chr30393 107 1075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30393g00001 19 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 45.290 7.91e-54 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30393g00001 - - cam:101492357 456.832