Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30388g00001 ATGATTATTTCTTACCTTTCTTGGGGTTTGCAGCCTGTAGGGGTTGTAGGTGCAATCACACCTTGGAACTTTCCCCTTGCTATGATCACCCGAAAGGTTGGTCCAGCCCTTGCATGTGGATGTACAGTGGTCATAAAGCCCTCTGAACTTACACCTCTGACGGCTTTAGCTGCAGCTGAACTCTCTATTCAAGCTGGAATTCCTGCGGGTGTTGTAAACGTGGTTATGGGAAATGCTCCTGATATTGGAGACGCTTTAATCGCAAGTCCACAG 273 0.4762 MIISYLSWGLQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALIASPQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30388g00001 91 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 11 91 - -
Trme30388g00001 91 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 5 91 IPR016162 GO:0016491
Trme30388g00001 91 SUPERFAMILY ALDH-like 10 90 IPR016161 GO:0016491
Trme30388g00001 91 Pfam Aldehyde dehydrogenase family 11 90 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30388g00001 Trme-Chr30388 10 1118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30388g00001 11 91 Aldehyde Dehydrogenase Gene Family AT1G79440 86.420 2.03e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30388g00001 K17761 - sly:100147726 149.058