Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme303833g00001 ATGGGTCAGATCCAGTACTCTGAGAAGTATTTTGATGATACTTATGAGTATAGGCATGTTGTTCTTCCTCCTGAAGTCGCTAAGTTGCTTCCTAAGAATCGGCTTCTCTCTGAAGTATGT 120 0.4083 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEVC 40
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme303833g00001 40 Pfam Cyclin-dependent kinase regulatory subunit 4 38 IPR000789 GO:0016538
Trme303833g00001 40 SMART CKS_2 3 40 IPR000789 GO:0016538
Trme303833g00001 40 Gene3D - 1 40 IPR036858 GO:0016538
Trme303833g00001 40 SUPERFAMILY Cell cycle regulatory proteins 2 39 IPR036858 GO:0016538
Trme303833g00001 40 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Trme303833g00001 40 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Trme303833g00001 40 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 38 - -
Trme303833g00001 40 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme303833g00001 1 38 Core Cell Cycle Gene Families AT2G27960 97.368 7.97e-23 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme303833g00001 K02219 - mnt:21395005 81.6481