Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme303737g00001 ACAAAGTGTGCAACTCAAGAAGTGTTTTCAGGATCAACCGTGAAGAAGGGCGAAATTGAAGCAATTGTGTATGCTACTGGTGTGCACACTTTTTTCGGAAAAGCGGCTCATTTGGTGGATAGTACAAACCAGGTTGGACATTTTCAGAAAGTGCTAACAGCTATCGGCAACTTCTGCATTTGTTCAATTGCGGTTGGAATAGTCGTGGAGCTTATTGTGATGTATCCGATTCAACACCGCAAGTATAGAGACGGAATTGATAATCTTTTGGTGCTATTGATCGGTGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACTATGGCTATCGGTTCTCATAGG 345 0.4203 TKCATQEVFSGSTVKKGEIEAIVYATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVVELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme303737g00001 115 Pfam E1-E2 ATPase 4 114 - -
Trme303737g00001 115 SUPERFAMILY Calcium ATPase, transmembrane domain M 39 115 IPR023298 -
Trme303737g00001 115 Gene3D - 27 115 - -
Trme303737g00001 115 SUPERFAMILY Calcium ATPase, transduction domain A 5 39 IPR008250 -
Trme303737g00001 115 Gene3D - 2 26 - -
Trme303737g00001 115 PANTHER CALCIUM-TRANSPORTING ATPASE 2 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme303737g00001 Trme-Chr303737 1 345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme303737g00001 1 115 Primary Pumps ATPases AT2G18960 88.696 8.24e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme303737g00001 K01535 - gmx:100785442 216.853