Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme303581g00001 ATGGCAAAGGGCAACCCTTGTCCTCGTGCCTACTATCGTTGCACTATGGCTGTAGGATGCCCAGTTCGCAAGCAG 75 0.5467 MAKGNPCPRAYYRCTMAVGCPVRKQ 25
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme303581g00001 25 Gene3D WRKY domain 1 25 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme303581g00001 25 Pfam WRKY DNA -binding domain 2 25 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme303581g00001 25 ProSiteProfiles WRKY domain profile. 1 25 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme303581g00001 25 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 25 IPR044810 GO:0003700
Trme303581g00001 25 SUPERFAMILY WRKY DNA-binding domain 2 25 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme303581g00001 Trme-Chr303581 121 195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme303581g00001 1 25 WRKY Transcription Factor Family AT1G62300 96.000 1.12e-14 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trme303581g00001 WRKY 1.8e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme303581g00001 - - sdul:129874702 60.4622