Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30350g00001 AATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGCGCTCTTTACCAAGATGCTGACATCTATCTATTTGATGACCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTTTTCAAGGAATGCTTGCTGGGTGTTTTAAGTTCAAAAACAGTTGTTTATGTTACTCATCAAGTGGAGTTCTTACCTACTGCTGACCTTATATTGGTCATGAAATATGGAAAAATTACTCAAAGTGGAAAGTATGCCGATCTGCTCAACAATGGGACCGATTTTATGGAACTCATCGGCGCACACAGAGACGCTATGTCTACACTTGAATCATTGGATGGAGGAAAAACATCTAATGAAATAAGCACCTTAGAAAAAGATGTAAATATTGCCGGCACTCATGAAGAGGTAAACAAAGATGAGCAAAATGGTGATAAAGGAGAACCAAAAGGCCAACTTG 457 0.3917 NLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGVLSSKTVVYVTHQVEFLPTADLILVMKYGKITQSGKYADLLNNGTDFMELIGAHRDAMSTLESLDGGKTSNEISTLEKDVNIAGTHEEVNKDEQNGDKGEPKGQL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30350g00001 152 Gene3D - 1 125 IPR027417 -
Trme30350g00001 152 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 125 - -
Trme30350g00001 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 93 IPR027417 -
Trme30350g00001 152 Pfam ABC transporter 1 29 IPR003439 GO:0005524
Trme30350g00001 152 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30350g00001 Trme-Chr30350 2 1171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30350g00001 2 118 Calmodulin-binding Proteins AT2G36910 35.294 3.82e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30350g00001 - K05666 gmx:100777836 246.128