Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30326g00001 ATGATTCAGGTTGACTACGCCTGTACACCTGAAGAAGTCCAACAGCATTTTCAGTCCTGTGGTACTGTGAACAGAGTGACAATACTGACAGACAAATTTGGCCAACCGAAAGGATTTGCTTACGTAGAATTTGTTGAGGTGTCTGCGAAACGTACAAATGTTCCTGGATTGAAGCAGTATTTTGGAAGAAGACCTGCTGGTTTCCGAGCAAGGAGGCCTTTCATGCCTTCACCATTCTATCCACCATATGCTTACGG 257 0.4475 MIQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVSAKRTNVPGLKQYFGRRPAGFRARRPFMPSPFYPPYAYG 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30326g00001 86 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 4 48 - -
Trme30326g00001 86 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 44 IPR000504 GO:0003723
Trme30326g00001 86 SUPERFAMILY RNA-binding domain, RBD 4 48 IPR035979 GO:0003676
Trme30326g00001 86 Gene3D - 2 66 IPR012677 -
Trme30326g00001 86 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 47 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30326g00001 Trme-Chr30326 497 905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30326g00001 3 44 Eukaryotic Initiation Factors Gene Family AT2G36660 40.476 3.39e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30326g00001 K14396 - gmx:100527545 156.762