Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme302975g00001 ATGGCCATTAGAAAATCCAACAAGTTACCACAACCAGATGTTATAATCAAGCAAATTCTTAAAAGATGTTCAAGTTTTGGAAAAAAACAGGGGTACAATGAACATGATCTTCCTGAAGATGTACCTAAAGGTCATTTTGTTGTCTATGTTGGAGAGAATAGAACAAGATATATTGTTCCAATTTCATGGTTGCCTCATCCACAGTTTCAAAGTTTGCTTCAAAGAGCTGAGGAAGAATTTGGATTTAATCATGACATGGGCCTTACTATCCCTTGTGATGAAGTTGTTTTTGAGTTTCTTACTTCATTGATCAGATAA 318 0.3459 MAIRKSNKLPQPDVIIKQILKRCSSFGKKQGYNEHDLPEDVPKGHFVVYVGENRTRYIVPISWLPHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSLIR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme302975g00001 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
Trme302975g00001 105 Pfam Auxin responsive protein 28 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme302975g00001 Trme-Chr302975 24 341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme302975g00001 5 104 Calmodulin-binding Proteins AT4G34750 45.098 4.18e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme302975g00001 K14488 - gmx:100500218 187.963